Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015793128.1_cds_XP_016516134.1_2769
CDS Infomation

[gene=LOC107832769] [db_xref=GeneID:107832769] [protein=ruBisCO large subunit-binding protein subunit alpha-like] [protein_id=XP_016516134.1] [location=complement(join(36871..37158,37559..38010,38482..38788,38892..39037,39132..39339,39492..39613,40292..40481,41056..41112))] [gbkey=CDS]
Sequence

ATGGCTTCTGCTAATGCAATTTCCACTGCCTCTATCATCCCTTCTCCTTCTAAACAGGGG
GCATTGAAGAACAGGAGGGTCAACCAATTGCAGGGACAGAAATTCAGCAACAGAAGTGCA
AAGAGCAACCGGTTTGTAGTCAAGGCCTGTGCTAAAGAAATTGCCTTTGACCAGAAATCT
AGGAGTGCCCTTCAGGCTGGTATCGATAAGCTTGCTGATGTCGTCGGTCTCACTCTTGGT
CCTAGGGGGAGGAATGTAGTGTTGGATGAATATGGCACCCCAAAGGTAGTTAATGACGGA
GTTACAATTGCTCGTGCTATAGAACTACCTGATGCCATGGAAAATGCTGGTGCTGCCCTT
ATCAGGGAGGTTGCAAGCAAAACCAACGATTCAGCTGGTGATGGAACCACAACTGCATCT
GTTCTTGCCCGCGAAATCATTAAACTTGGTCTGTTGAGTGTTACATCTGGTGCAAACCCA
GTGTCTTTGAAGAAGGGCATTGATAAAACTGTACTTGGTTTGATTGAAGAGCTAGAAAAG
AAGGCTAGACCTGTTAAAGGTCGTGATGACATCAAAGCTATTGCTTCAATCTCTGCTGGC
AATGATGAAAGTATTGGCACCATGATTGCGGATGCAATTGACAAAGTCGGTCCAGATGGT
GTGTTGTCCATTGAGTCATCCTCCTCCTTTGAGACAACTGTTCATGTTGAAGAAGGAATG
GAGATTGATAGAGGATATATTTCCCCACAATTTGTCACCAACCCTGAAAAATTAATTGTT
GAGTTTGAGAATGCTAGAGTCTTGGTCACGGATCAGAAGATCTCGGCTATCAAGGATATT
ATCCCTCTATTAGAGAAGACAACTCAATTACGCTCCCCTCTGCTCATTATTGCTGAAGAT
GTCACCGGGGAAGCTCTGGCTACTCTTGTTGTGAACAAGCTGCGGGGTATACTGAACGTT
GCCGCCATCAAAGCTCCTGGATTTGGTGAAAGGAGAAAGGCTCTTCTGCAAGATATTGCC
ATTGTGACAGGAGCTGAGTACCAAGCAACTGACCTGGGCCTGCTCATTGAGGGTACCCCA
GTTGAAGCACTTGGAATTGCCAGAAAGGTGACCATTAGCAAGGACTCAACAACCATCATT
GCTGATGCCGCATCGAAGGATGAGATACAGGCTAGGATTGCTCAGCTCAAAAAGGAGTTG
TCCGAGACAGACTCGGTTTACGACTCCGAGAAACTTGCTGAGAGAATCGCCAAGTTGTCT
GGGGGTGTTGCCGTCATCAAGGTCGGAGCTGCTACAGAGGCTGAGCTTGAGGACCGCAAG
CTTCGCATTGAGGATGCAAAGAATGCAACTTTTGCTGCAATCGAAGAGGGAATAGTACCT
GGTGGTGGTGCTGCCTTTGTTCATCTATCAACTTATGTCCCTGCGATTAAGGACAAGCTC
GAAGATGCAGATGAAAAGTTGGGTGCTGACATCATTCAAAGGGCATTAGTAGCCCCAGCA
TCTTTGATAGCCCAAAATGCAGGAATTGAAGGGGAAGTAGTAGTGGAGAAGGTAAGGGAA
GCTGAATGGGAGATGGGCTATAACGCGATGACAGACAAATACGAGAATCTTGTTGACGCT
GGAGTCATCGATCCAGCCAAGGTGACGAGATGTGCACTGCAGAATTCAGCGTCAGTTGCA
GGAATGGTACTTACAACACAAGCCATTGTGGTCGAGAAGGCAAAGCCTAAGACAGCTGCA
CCTGCTGCTCCACAAGGGCTCACAGTGTGA

Peptide Sequence

PEP ID

XP_016516134.1
PEP Infomation

PREDICTED: ruBisCO large subunit-binding protein subunit alpha-like [Nicotiana tabacum]
Sequence

MASANAISTASIIPSPSKQGALKNRRVNQLQGQKFSNRSAKSNRFVVKACAKEIAFDQKS
RSALQAGIDKLADVVGLTLGPRGRNVVLDEYGTPKVVNDGVTIARAIELPDAMENAGAAL
IREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVLGLIEELEK
KARPVKGRDDIKAIASISAGNDESIGTMIADAIDKVGPDGVLSIESSSSFETTVHVEEGM
EIDRGYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAED
VTGEALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEYQATDLGLLIEGTP
VEALGIARKVTISKDSTTIIADAASKDEIQARIAQLKKELSETDSVYDSEKLAERIAKLS
GGVAVIKVGAATEAELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSTYVPAIKDKL
EDADEKLGADIIQRALVAPASLIAQNAGIEGEVVVEKVREAEWEMGYNAMTDKYENLVDA
GVIDPAKVTRCALQNSASVAGMVLTTQAIVVEKAKPKTAAPAAPQGLTV

Transcript Sequence

Gene sequence data has not been registered.